PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22198.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 221aa    MW: 24898.3 Da    PI: 5.9224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22198.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73e-0665113454
                 HHHHHHHHHHHHHHHH.HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsa.feeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RR+r+N++ f  L ++l +    +  + +K +iL  A++ +++L
  KHN22198.1  65 SKACREKLRRERLNERqFCDLSSVLEPG---RPVRTDKPAILDDAIRVLSQL 113
                 6778**********9758*********8...89*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.01361113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-465118No hitNo description
SuperFamilySSF474591.57E-867140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-467119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-669134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MDSLEDSGCW DFLDYSFIDQ APPDFLWSNN NNSVSTEIDI PGDAVACQEN TKKRGRTDSC  60
FKAGSKACRE KLRRERLNER QFCDLSSVLE PGRPVRTDKP AILDDAIRVL SQLKTEAQEL  120
KKTNEKLLEE IKCLKAEKNE LREEKLVLKA DKERIEKQLK ALPVAPAGFM APPVAAAAAA  180
YQAGVNKMAV YPNYGYIPMW QYLPQSVRDT SHDHELRPPA A
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0946680.0BT094668.1 Soybean clone JCVI-FLGm-5P4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003555760.11e-153PREDICTED: transcription factor bHLH104-like isoform X1
SwissprotQ8L4671e-74BH104_ARATH; Transcription factor bHLH104
TrEMBLA0A0B2QQR01e-164A0A0B2QQR0_GLYSO; Transcription factor bHLH104
STRINGGLYMA20G22010.11e-153(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81792537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-52bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]